BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011F04SP1|AL426240
(739 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1426 1411 0.0
>3x_Contig1426
Length = 8319
Score = 1411 bits (706), Expect = 0.0
Identities = 726/739 (98%)
Strand = Plus / Minus
Query: 1 atccttcaaagctgacatatcaacactgttagcttcttgaatctcatggtcggttctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3774 atccttcaaagctgacatatcaacactgttagcttcttgaatctcatggtcggttctgtg 3715
Query: 61 tctgatgaaaactggcttaccttgccatttcacaacgacatttttaccttctggaatagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3714 tctgatgaaaactggcttaccttgccatttcacaacgacatttttaccttctggaatagc 3655
Query: 121 agccaagttgacttcgaccttagccatagccaaaacatctgcagatgcagacatagaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3654 agccaagttgacttcgaccttagccatagccaaaacatctgcagatgcagacatagaagc 3595
Query: 181 gatgaaagtttcaacggtggatttggcaccggcagaggacaacaaacctaaagaaccaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3594 gatgaaagtttcaacggtggatttggcaccggcagaggacaacaaacctaaagaaccaac 3535
Query: 241 cataaagtaagcctaagaacgacctttgtcagcatcgttattctccttgatatagtctcc 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3534 cataaagtaagcataagaacgacctttgtcagcatcgttattctccttgatatagtctcc 3475
Query: 301 gawatctggagttctgtwagtdgacttggcagcaactgcagaagtngaaattaatctggc 360
|| |||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 3474 gaaatctggagttctgtaagtagacttggcagcaactgcagaagtagaaattaatctggc 3415
Query: 361 tggagccacagacttcaaaccagtcttcaaaccgtttcttaaacccaacatttttgatat 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3414 tggagcaacagacttcaaaccagtcttcaaaccgtttcttaaacccaacatttttgatat 3355
Query: 421 tagttagttatggatatatcgctagagtgtattattcgtactaatttcccgttcttattt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3354 tagttagttatggatatatcgctagagtgtattattcgtactaatttcccgttcttattt 3295
Query: 481 cggagaaatcgtttctatgatatcgactttwatcacaacagccaagcactctcggagtat 540
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 3294 cggagaaatcgtttctatgatatcgactttaatcacaacagcaaagcactctcggagtat 3235
Query: 541 caataaatatatacacagatatgaatcaccaagccagattatwawatatatatvtcaatg 600
|||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||
Sbjct: 3234 caataaatatatacacagatatgaatcaccaagccagattataaaatatatatatcaatg 3175
Query: 601 caaaavtgttgttggaactgaaagtaataataaaatgattgtactaaatctttttctatt 660
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3174 caaaaatgttgttggaactgaaagtaataataaaatgattgtactaaatctttttctatt 3115
Query: 661 ttattttattcagagaaattatcaaattatctctatccatattaaacagaagccattgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3114 ttattttattcagagaaattatcaaattatctctatccatattaaacagaagccattgca 3055
Query: 721 gcttaataagtgcggragg 739
||||||||||||||| |||
Sbjct: 3054 gcttaataagtgcggaagg 3036
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5639
Number of Sequences: 1807
Number of extensions: 5639
Number of successful extensions: 150
Number of sequences better than 1.0e-20: 1
length of query: 739
length of database: 10,358,551
effective HSP length: 16
effective length of query: 723
effective length of database: 10,329,639
effective search space: 7468328997
effective search space used: 7468328997
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)